The junior college wing of the MIT Group of Institutions is affiliated with the Maharashtra State Board of Secondary and Higher Secondary Education offering Science, Commerce & Arts including Electronics, Computer Science, and Crop Science as bifocal and Vocational courses to the HSC aspirants. Operational since 2014, MIT Junior College has gained its reputation as one of the pioneers of the Integrated HSC program in Maharashtra.

The Integrated HSC Curriculum prepares the Science students for qualifying MHT-CET, JEE Main, and NEET tests for the aspirants. Similarly, Commerce students are also groomed to prepare for CA-CS Foundation entrance tests along with the HSC curriculum.